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If you want to be cheaper, you can use a firewire drive, but you'll need to record to P2 first. Otherwise, you could use a program like OnLocation in Windows. If I were designing something from scratch I could see the advantages of Linux, but there's so much out there already, and there's no way that most of us would be able to create something as reliable as the firestore.
I would think that it wouldn't matter if it was linux compatible as long as you used it for storage and then transferred from that storage to another computer.