mixed footage from 2 cams in FCS

timbook2

Veteran
I need some help if possible: shot with HVX and GH1 but HVX was set to DVCPRO
Now I have the following 2 types of footage:
HVX= 25 fps 1024x576 DVCPRO PAL
GH1= 50 fps 1280x720 ProRes

I did manage to work with both formats on a timeline by tweaking motion and distort
BUT: I have the green line and if the project sits idle for a while it starts rendering and the rendered material looks totally different on the HVX track!

Does anybody have a best working solution for this mismatched footage problem?
 
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